Prinseq-liteΒΆ

PR eprocessing and IN formation of SEQ uence data. PRINSEQ will help you to preprocess your genomic or metagenomic sequence data in FASTA or FASTQ format.

The lite version is a standalone perl script (prinseq-lite.pl) that does not require any non-core perl modules for processing.

The used modules are:

Getopt::Long Pod::Usage
File::Temp qw(tempfile)
Fcntl qw(:flock SEEK_END)
Digest::MD5 qw(md5_hex)
Cwd List::Util qw(sum min max)

Also PRINSEQ is available in web and graphics version.

For additional information you can open those links: