IQ-TREE 2.1.2

Basic information

Tested on (Requirements)

  • OS base: CentOS (x86_64) \(\boldsymbol{\ge}\) 6.6 (Rocks 6.2)
  • Dependencies:
    • GCC > 7.4.0

Installation

  1. Download the desired version of the software (Source code - tar.gz)

    mkdir apps/iqutree -p
cd apps/iqutree/
wget https://github.com/iqtree/iqtree2/releases/download/v2.1.2/iqtree-2.1.2-Linux.tar.gz
tar xfz iqtree-2.1.2-Linux.tar.gz

  2. Enter to the extracted folder.

    cd icu-release-68-1/iqtree-2.1.2-Linux
module load gcc/7.4.0

  3. Continue with the following steps:

    sudo mkdir -p /share/apps/iqutree/2.1.2/
sudo cp * /share/apps/iqutree/2.1.2/ -r

Module

#%Module1.0#####################################################################
##
## module iqutree/2.1.2
##
## /share/apps/modules/iqutree/2.1.2 Written by Tomas Navarro Munera
##

proc ModulesHelp { } {
    puts stderr "\tiqutree/2.1.2 - sets the Environment for BEAST2 \
    \n\tin the share directory /share/apps/iqutree/2.1.2\n"
}

module-whatis "\n\n\tSets the environment for using beast2\n"

# for Tcl script use only
set     topdir          /share/apps/iqutree/2.1.2
set     version         2.1.2
set     sys             linux-x86_64

conflict iqutree

module load gcc/7.4.0

prepend-path PATH               $topdir/bin

Usage mode

module load iqutree/2.1.2