Cufflinks 2.2.1
Installation date: 28/02/2017
Apolo version: Apolo II
License: Boost Software License, Version 1.0
Installation
These are the steps to install Cufflinks:
Download the latest version of the software (Binaries - bz2) (http://cole-trapnell-lab.github.io/cufflinks/install/):
cd /home/$USER/apps/cufflinks/src
wget http://cole-trapnell-lab.github.io/cufflinks/assets/downloads/cufflinks-2.2.1.Linux_x86_64.tar.gz
tar xf cufflinks-2.2.1.Linux_x86_64.tar.gz
For installation, the following steps must be done:
..code-block:: bash
cd cufflinks-2.2.1.Linux_x86_64 sudo mkdir -p /share/apps/cufflinks/2.2.1/bin sudo cp cuff* g* /share/apps/cufflinks/2.2.1/bin
Module
#%Module1.0#####################################################################
##
## module cufflinks/2.2.1
##
## /share/apps/modules/cufflinks/2.2.1 Written by Mateo Gomez-Zuluaga
##
proc ModulesHelp { } {
puts stderr "\tcufflinks/2.2.1_intel-2017_update-1 - sets the Environment for Cufflinks in \
\n\tthe share directory /share/apps/cufflinks/2.2.1\n"
}
module-whatis "\n\n\tSets the environment for using Cufflinks 2.2.1 \n"
# for Tcl script use only
set topdir /share/apps/cufflinks/2.2.1
set version 2.2.1
set sys x86_64-redhat-linux
repend-path PATH $topdir/bin
Mode of use
Load the necessary environment through the module:
module load cufflinks/2.2.1
TO-DO