NetCDF 4.8.0 disable netcdf 4

Basic information

Tested on (Requirements)

  • OS base: Rocky Linux 8.5 (x86_64)
  • Dependencies:
    • gcc v9.3.0
    • curl v.7.77.0
    • Mpich v.3.4.2
    • Zlib v.1.2.11

Installation

  1. Load required modules.

    module load gcc/9.3.0
module load curl/7.77.0_gcc-9.3.0
module load mpich/3.4.2_gcc-9.3.0

  2. Configure the following environment variables that specify the compilers to use:

    export CC=mpicc
export CXX=mpicxx
export FC=mpif90
export F77=mpif90
export F90=mpif90

  3. Download the desired version of the software (Source code - tar.gz)

    cd /home/blopezp
wget https://ftp.unidata.ucar.edu/pub/netcdf/netcdf-c-4.8.0.tar.gz
tar -xvf netcdf-4.3.3.tar.gz

  4. After unpacking NetCDF, continue with the following steps for configuration and compilation only WRF-CMAQ:

    cd netcdf-c-4.8.0.tar.gz

CPPFLAGS="-I/share/apps/curl/7.77.0/gcc-9.3.0/include" LDFLAGS="-L/share/apps/curl/7.77.0/gcc-9.3.0/lib" ./configure --prefix=/share/apps/netcdf/4.8.0/gcc-9.3.0 --disable-netcdf-4

make -j 10 2>&1 | tee netcdf-make.log
make check 2>&1 | tee netcdf-make-check.log
sudo mkdir -p /share/apps/netcdf/4.8.0
sudo make -j 10 install 2>&1 | tee netcdf-make-install.log

Module

#%Module1.0####################################################################
##
## module load netcdf/4.8.0_gcc-9.3.0
##
## /share/apps/modules/netcdf/4.8.1_Intel_oneAPI_2022-update-1
## Written by Bryan Lopez Parra
##

proc ModulesHelp {} {
     global version modroot
     puts stderr "Sets the environment for using netcdf 4.8.1\
                  \nin the shared directory \
                  \n/share/apps/netcdf/4.8.0/gcc-9.3.0 builded with\
                  \nGCC 9.3.0,\
                  \nzlib-1.2.11"
}

module-whatis "(Name________) netcdf"
module-whatis "(Version_____) 4.8.0"
module-whatis "(Compilers___) gcc-9.3.0"
module-whatis "(System______) x86_64-redhat-linux"
module-whatis "(Libraries___) zlib-1.2.11"

# for Tcl script use only
set         topdir        /share/apps/netcdf/4.8.0/gcc-9.3.0
set         version       4.8.0
set         sys           x86_64-redhat-linux

conflict netcdf

module load curl/7.77.0_gcc-9.3.0



#setenv                 NETCDF                  $topdir

prepend-path    PATH                    $topdir/bin

setenv          NCDIR                   $topdir

prepend-path    LD_LIBRARY_PATH         $topdir/lib
prepend-path    LIBRARY_PATH            $topdir/lib
prepend-path    LD_RUN_PATH             $topdir/lib

prepend-path    C_INCLUDE_PATH          $topdir/include
prepend-path    CXX_INCLUDE_PATH        $topdir/include
prepend-path    CPLUS_INCLUDE_PATH      $topdir/include

prepend-path    PKG_CONFIG_PATH         $topdir/lib/pkgconfig

prepend-path    MANPATH                 $topdir/share/man

Use

module load zlib/1.2.11_gcc-9.3.0